Exponentially Modified Protein Abundance Index (emPAI) for Estimation of Absolute Protein Amount in Proteomics by the Number of Sequenced Peptides per Protein
Workflow
- get the data (in a map) - DONE
Class MSExperiment
- get identifications for the data - DONE
XTandemAdapter
- determine (count) the number of detected peptides per protein - in progress
- determine the number of detectable peptides per protein
as described in the paper
- calculate the emPAI value