Page MultiReadAssignments

This project will check the quality of mapper(s) concerning the multi-reads assignment.

Schedule

• Generate random sequence OR get an appropriate data set from readakf (containing multi-reads)
• Insert multi-reads with modifications (SNPs, indels) into generated sequence on different locations, find multi-reads, respectively
• Create reads out of sequence and label them (with corresponding multi-reads)
• Use mapper (Bowtie/Maq)
• Analyse and visualize results by comparing mappers results with real reads' locations

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