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You are here: Foswiki>ABI Web>LectureWiki>AdvancedAlgorithms>QuantProtP4>QuantProtP4_Fingerprint (19 Jul 2010, cstandfu)Edit Attach
Page QuantProtP4_Fingerprint
Project Planning for QuantProtP4 - Mass fingerprinting(1) Digestion of protein sequences
- Naive tryptic digestion (split after every K,R - consider c-terminal P)
- Proteolytic incomplete digestion - with a certain percentage, not every fragment is digested at K or R
(- Tryptic digestion of K,R and only modified C's) missing references for digestion of C, hence it was excluded
(implemented)
(2) Post-translational modifications
- Some modifications taken from unimod.org were used for post-translational modifications
(implemented)
(3) Comparison of feature mass and quality values with theoretical mass and their distance
(implemented)
(4) Mass decimal plot
(implemented)
Comments
why split after "C"?
-- ChrisBielow - 16 Jun 2010Edit | Attach | Print version | History: r10 < r9 < r8 < r7 | Backlinks | View wiki text | Edit wiki text | More topic actions
Topic revision: r9 - 19 Jul 2010, cstandfu
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